Statistics with R
- Statistics with R
- R Objects, Numbers, Attributes, Vectors, Coercion
- Matrices, Lists, Factors
- Data Frames in R
- Control Structures in R
- Functions in R
- Data Basics: Compute Summary Statistics in R
- Central Tendency and Spread in R Programming
- Data Basics: Plotting – Charts and Graphs
- Normal Distribution in R
- Skewness of statistical data
- Bernoulli Distribution in R
- Binomial Distribution in R Programming
- Compute Randomly Drawn Negative Binomial Density in R Programming
- Poisson Functions in R Programming
- How to Use the Multinomial Distribution in R
- Beta Distribution in R
- Chi-Square Distribution in R
- Exponential Distribution in R Programming
- Log Normal Distribution in R
- Continuous Uniform Distribution in R
- Understanding the t-distribution in R
- Gamma Distribution in R Programming
- How to Calculate Conditional Probability in R?
- How to Plot a Weibull Distribution in R
- Hypothesis Testing in R Programming
- T-Test in R Programming
- Type I Error in R
- Type II Error in R
- Confidence Intervals in R
- Covariance and Correlation in R
- Covariance Matrix in R
- Pearson Correlation in R
- Normal Probability Plot in R
How to Calculate Conditional Probability in R?
Conditional Probability
Conditional probability is a measure of the likelihood of an event occurring, given that another event has already occurred. It allows us to update our beliefs about the probability of an event based on new information. Conditional probability is written as P(B | A), which is read as “the probability of event B given event A.” It can be calculated using the following formula:
P(B | A) = P(A and B) / P(A)
where:
- P(B | A) is the conditional probability of event B occurring given event A has occurred.
- P(A and B) is the joint probability of both events A and B occurring together.
- P(A) is the probability of event A occurring.
To better illustrate the concept, let’s consider an example:
Suppose we have a deck of 52 playing cards. We know that there are 13 hearts and 12 face cards in the deck. Let’s calculate the conditional probability of drawing a face card, given that the card is a heart.
- First, we need to determine the probability of drawing a heart (event A). There are 13 hearts in the deck, so: P(A) = 13 / 52 = 1/4
- Next, we need to find the joint probability of drawing a face card and a heart (event A and B). There are 3 face cards that are also hearts (the King, Queen, and Jack of hearts), so: P(A and B) = 3 / 52
- Finally, we can calculate the conditional probability of drawing a face card given that the card is a heart (P(B | A)): P(B | A) = P(A and B) / P(A) = (3 / 52) / (1/4) = 3/13
So, the probability of drawing a face card given that the card is a heart is 3/13 or approximately 0.2308.
Calculate Conditional Probability in R
To calculate conditional probability in R, you can use the prop.table()
function. Let’s assume you have a data frame with two variables (or columns) named A and B, and you want to find the conditional probability P(B | A). Here’s how to do it:
- Create a contingency table (also known as a cross-tabulation or crosstab) using the
table()
function. - Convert the contingency table into a conditional probability table using the
prop.table()
function.
Here’s a step-by-step example:
# Sample data data <- data.frame( A = c("a1", "a1", "a1", "a2", "a2", "a2"), B = c("b1", "b1", "b2", "b1", "b2", "b2") ) # Create a contingency table contingency_table <- table(data$A, data$B) # Calculate the conditional probability table P(B | A) conditional_probability_table <- prop.table(contingency_table, margin = 1) # Print the conditional probability table print(conditional_probability_table)
The conditional_probability_table
variable will now contain the conditional probabilities P(B | A) for all combinations of A and B. The margin = 1
argument in the prop.table()
function indicates that the probabilities should be calculated by dividing each cell by the row sums (i.e., the probabilities are conditioned on the first variable, A).
If you want to find a specific conditional probability, like P(B=b1 | A=a1), you can access the corresponding cell in the conditional probability table:
probability_b1_given_a1 <- conditional_probability_table["a1", "b1"] print(probability_b1_given_a1)
Remember to replace the sample data with your own dataset and variable names.
Example 2 – Cloudy Days
Let’s consider another example of calculating conditional probabilities using R. We’ll work with data related to the likelihood of rain given the presence of clouds.
First, let’s create a simple data frame with the information:
# Data frame with weather information weather_data <- data.frame( Cloudy = c("Yes", "Yes", "No", "No"), Rain = c("Yes", "No", "Yes", "No"), Frequency = c(30, 20, 10, 40) )
This table represents the frequency of different weather conditions in a particular region:
Cloudy | Rain | Frequency |
---|---|---|
Yes | Yes | 30 |
Yes | No | 20 |
No | Yes | 10 |
No | No | 40 |
Now, let’s calculate the conditional probability of rain given the presence of clouds (P(Rain | Cloudy)):
# Total frequency of cloudy days total_cloudy <- sum(weather_data$Frequency[weather_data$Cloudy == "Yes"]) # Frequency of rainy days when it's cloudy rainy_and_cloudy <- weather_data$Frequency[weather_data$Cloudy == "Yes" & weather_data$Rain == "Yes"] # Conditional probability of rain given clouds P_rain_given_cloudy <- rainy_and_cloudy / total_cloudy P_rain_given_cloudy
In this example, the total frequency of cloudy days is 50 (30 + 20), and the frequency of rainy days when it’s cloudy is 30. The conditional probability of rain given clouds is 30 / 50 = 0.6 or 60%.
Example 3 – Student Information
Let’s consider another example using conditional probabilities in R. This time, we’ll work with data related to the likelihood of passing an exam given the attendance in a course.
First, let’s create a simple data frame with the information:
# Data frame with student information student_data <- data.frame( Attendance = c("High", "High", "Low", "Low"), Pass = c("Yes", "No", "Yes", "No"), Frequency = c(80, 20, 30, 70) )
This table represents the frequency of different student outcomes in a particular course:
Attendance | Pass | Frequency |
---|---|---|
High | Yes | 80 |
High | No | 20 |
Low | Yes | 30 |
Low | No | 70 |
Now, let’s calculate the conditional probability of passing the exam given high attendance (P(Pass | High Attendance)):
# Total frequency of students with high attendance total_high_attendance <- sum(student_data$Frequency[student_data$Attendance == "High"]) # Frequency of students who pass the exam with high attendance pass_and_high_attendance <- student_data$Frequency[student_data$Attendance == "High" & student_data$Pass == "Yes"] # Conditional probability of passing the exam given high attendance P_pass_given_high_attendance <- pass_and_high_attendance / total_high_attendance P_pass_given_high_attendance
In this example, the total frequency of students with high attendance is 100 (80 + 20), and the frequency of students who pass the exam with high attendance is 80. The conditional probability of passing the exam given high attendance is 80 / 100 = 0.8 or 80%.